STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ71140.12-oxoacid ferredoxin oxidoreductase, subunit alpha. (574 aa)    
Predicted Functional Partners:
AAZ71141.1
2-oxoacid ferredoxin oxidoreductase, subunit beta.
 
 0.999
porB
Pyruvate ferredoxin oxidoreductase, beta subunit.
  
 0.987
AAZ72064.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
  
 0.987
porD
Pyruvate ferredoxin oxidoreductase, delta subunit.
  
 0.983
porC
Pyruvate ferredoxin oxidoreductase, gamma subunit.
  
 0.980
AAZ71100.1
AMP-binding protein.
  
 
 0.928
AAZ69693.1
Citrate synthase.
  
 
 0.925
AAZ69203.1
Acetolactate synthase, small subunit.
  
 
 0.924
AAZ69202.1
Acetolactate synthase, large subunit.
  
 
 0.923
AAZ69421.1
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
  
 
 0.923
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.