Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHU_1216 | CHU_1217 | CHU_1216 | CHU_1217 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Anti-sigma regulatory factor; Ser/Thr protein kinase. | 0.977 |
CHU_1216 | CHU_1218 | CHU_1216 | CHU_1218 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Possible negative regulator of sigma-B. | 0.999 |
CHU_1216 | CHU_1219 | CHU_1216 | CHU_1219 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Positive regulator of sigma-B. | 0.998 |
CHU_1216 | CHU_1702 | CHU_1216 | CHU_1702 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Anti-anti-sigma regulatory factor; Belongs to the anti-sigma-factor antagonist family. | 0.984 |
CHU_1216 | CHU_2080 | CHU_1216 | CHU_2080 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Sensor histidine kinase/response regulator fusion protein. | 0.938 |
CHU_1216 | CHU_2895 | CHU_1216 | CHU_2895 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | PAS/PAC sensor hybrid histidine kinase. | 0.961 |
CHU_1216 | arcB-11 | CHU_1216 | CHU_2784 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Multi-sensor hybrid histidine kinase. | 0.962 |
CHU_1216 | evgS-3 | CHU_1216 | CHU_3089 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Sensor histidine kinase/response regulator fusion protein. | 0.969 |
CHU_1216 | spoIIA | CHU_1216 | CHU_1913 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family. | 0.984 |
CHU_1216 | spoIIAA | CHU_1216 | CHU_0194 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.984 |
CHU_1217 | CHU_1216 | CHU_1217 | CHU_1216 | Anti-sigma regulatory factor; Ser/Thr protein kinase. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.977 |
CHU_1217 | CHU_1218 | CHU_1217 | CHU_1218 | Anti-sigma regulatory factor; Ser/Thr protein kinase. | Possible negative regulator of sigma-B. | 0.983 |
CHU_1217 | CHU_1219 | CHU_1217 | CHU_1219 | Anti-sigma regulatory factor; Ser/Thr protein kinase. | Positive regulator of sigma-B. | 0.979 |
CHU_1217 | CHU_1702 | CHU_1217 | CHU_1702 | Anti-sigma regulatory factor; Ser/Thr protein kinase. | Anti-anti-sigma regulatory factor; Belongs to the anti-sigma-factor antagonist family. | 0.665 |
CHU_1217 | CHU_2080 | CHU_1217 | CHU_2080 | Anti-sigma regulatory factor; Ser/Thr protein kinase. | Sensor histidine kinase/response regulator fusion protein. | 0.737 |
CHU_1217 | CHU_2895 | CHU_1217 | CHU_2895 | Anti-sigma regulatory factor; Ser/Thr protein kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.818 |
CHU_1217 | arcB-11 | CHU_1217 | CHU_2784 | Anti-sigma regulatory factor; Ser/Thr protein kinase. | Multi-sensor hybrid histidine kinase. | 0.841 |
CHU_1217 | evgS-3 | CHU_1217 | CHU_3089 | Anti-sigma regulatory factor; Ser/Thr protein kinase. | Sensor histidine kinase/response regulator fusion protein. | 0.852 |
CHU_1217 | spoIIA | CHU_1217 | CHU_1913 | Anti-sigma regulatory factor; Ser/Thr protein kinase. | Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family. | 0.666 |
CHU_1217 | spoIIAA | CHU_1217 | CHU_0194 | Anti-sigma regulatory factor; Ser/Thr protein kinase. | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.665 |
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