STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpnPossible adenine-specific DNA methylase. (254 aa)    
Predicted Functional Partners:
dpnA
Helicase, SNF2 family.
     0.959
hsdS
Probable type I restriction-modification system.
  
 
 0.846
hsdS-2
Type I site-specific deoxyribonuclease S subunit.
  
 
 0.846
hsdS-3
Type I site-specific deoxyribonuclease S subunit.
  
 
 0.846
CHU_1467
Hypothetical protein.
       0.773
CHU_1469
Hypothetical protein.
       0.773
hsdR
Restriction enzyme type I helicase subunit; type I restriction enzyme HsdR.
  
 
 0.767
hsdR-2
Type I restriction-modification system R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.767
CHU_1470
Hypothetical protein.
       0.701
CHU_1471
Conserved hypothetical protein.
       0.701
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.