Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHU_2247 | ubiE | CHU_2247 | CHU_2710 | Conserved hypothetical protein. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.400 |
CHU_2708 | CHU_2709 | CHU_2708 | CHU_2709 | Hypothetical protein. | PorT-related protein. | 0.522 |
CHU_2708 | ubiE | CHU_2708 | CHU_2710 | Hypothetical protein. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.478 |
CHU_2709 | CHU_2708 | CHU_2709 | CHU_2708 | PorT-related protein. | Hypothetical protein. | 0.522 |
CHU_2709 | CHU_2712 | CHU_2709 | CHU_2712 | PorT-related protein. | Hypothetical protein. | 0.404 |
CHU_2709 | ubiE | CHU_2709 | CHU_2710 | PorT-related protein. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.755 |
CHU_2712 | CHU_2709 | CHU_2712 | CHU_2709 | Hypothetical protein. | PorT-related protein. | 0.404 |
CHU_2712 | ubiE | CHU_2712 | CHU_2710 | Hypothetical protein. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.438 |
ispB | menA | CHU_2276 | CHU_0326 | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 1,4-dihydroxy-2-naphtoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.837 |
ispB | ubiE | CHU_2276 | CHU_2710 | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.561 |
menA | ispB | CHU_0326 | CHU_2276 | 1,4-dihydroxy-2-naphtoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.837 |
menA | ubiE | CHU_0326 | CHU_2710 | 1,4-dihydroxy-2-naphtoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.907 |
ubiE | CHU_2247 | CHU_2710 | CHU_2247 | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | Conserved hypothetical protein. | 0.400 |
ubiE | CHU_2708 | CHU_2710 | CHU_2708 | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | Hypothetical protein. | 0.478 |
ubiE | CHU_2709 | CHU_2710 | CHU_2709 | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | PorT-related protein. | 0.755 |
ubiE | CHU_2712 | CHU_2710 | CHU_2712 | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | Hypothetical protein. | 0.438 |
ubiE | ispB | CHU_2710 | CHU_2276 | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.561 |
ubiE | menA | CHU_2710 | CHU_0326 | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 1,4-dihydroxy-2-naphtoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.907 |