node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHU_0040 | CHU_2837 | CHU_0040 | CHU_2837 | ATPase involved in DNA repair. | Bifunctional non-homologous end joining protein LigD; ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module. | 0.825 |
CHU_0040 | dnaN | CHU_0040 | CHU_1549 | ATPase involved in DNA repair. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.667 |
CHU_0040 | polA | CHU_0040 | CHU_3657 | ATPase involved in DNA repair. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.901 |
CHU_0081 | CHU_2837 | CHU_0081 | CHU_2837 | DNA polymerase IV, family X. | Bifunctional non-homologous end joining protein LigD; ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module. | 0.908 |
CHU_0081 | CHU_2839 | CHU_0081 | CHU_2839 | DNA polymerase IV, family X. | Conserved hypothetical protein. | 0.400 |
CHU_0081 | CHU_3497 | CHU_0081 | CHU_3497 | DNA polymerase IV, family X. | Exodeoxyribonuclease III. | 0.769 |
CHU_0081 | dnaN | CHU_0081 | CHU_1549 | DNA polymerase IV, family X. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.789 |
CHU_0081 | polA | CHU_0081 | CHU_3657 | DNA polymerase IV, family X. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.916 |
CHU_0081 | xthA | CHU_0081 | CHU_2061 | DNA polymerase IV, family X. | Exodeoxyribonuclease III (exonuclease III). | 0.769 |
CHU_2291 | CHU_2837 | CHU_2291 | CHU_2837 | DNA topoisomerase IB. | Bifunctional non-homologous end joining protein LigD; ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module. | 0.711 |
CHU_2291 | ku | CHU_2291 | CHU_2838 | DNA topoisomerase IB. | Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.621 |
CHU_2291 | polA | CHU_2291 | CHU_3657 | DNA topoisomerase IB. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.438 |
CHU_2837 | CHU_0040 | CHU_2837 | CHU_0040 | Bifunctional non-homologous end joining protein LigD; ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module. | ATPase involved in DNA repair. | 0.825 |
CHU_2837 | CHU_0081 | CHU_2837 | CHU_0081 | Bifunctional non-homologous end joining protein LigD; ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module. | DNA polymerase IV, family X. | 0.908 |
CHU_2837 | CHU_2291 | CHU_2837 | CHU_2291 | Bifunctional non-homologous end joining protein LigD; ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module. | DNA topoisomerase IB. | 0.711 |
CHU_2837 | CHU_2839 | CHU_2837 | CHU_2839 | Bifunctional non-homologous end joining protein LigD; ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module. | Conserved hypothetical protein. | 0.799 |
CHU_2837 | CHU_3497 | CHU_2837 | CHU_3497 | Bifunctional non-homologous end joining protein LigD; ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module. | Exodeoxyribonuclease III. | 0.802 |
CHU_2837 | dnaN | CHU_2837 | CHU_1549 | Bifunctional non-homologous end joining protein LigD; ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.979 |
CHU_2837 | ku | CHU_2837 | CHU_2838 | Bifunctional non-homologous end joining protein LigD; ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module. | Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.982 |
CHU_2837 | polA | CHU_2837 | CHU_3657 | Bifunctional non-homologous end joining protein LigD; ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.958 |