STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_3751Hypothetical protein. (276 aa)    
Predicted Functional Partners:
CHU_3752
Outer membrane protein.
 
     0.945
CHU_3753
Conserved hypothetical protein.
 
     0.925
CHU_3750
Hypothetical protein.
 
     0.872
CHU_2578
Conserved hypothetical protein.
  
     0.556
CHU_2135
Conserved hypothetical protein.
  
     0.553
CHU_0919
Protein involved in gliding motility RemB.
  
     0.461
CHU_3749
Conserved hypothetical protein.
       0.459
CHU_2805
Hydrolase, alpha/beta superfamily.
  
     0.456
CHU_2134
Conserved hypothetical protein.
  
     0.455
CHU_1938
Conserved hypothetical protein.
  
     0.447
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.