STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_3810Glycogen debranching enzyme. (661 aa)    
Predicted Functional Partners:
glgP
A-glucan phosphorylase, glycosyltransferase family 35 protein.
 
 
 0.790
CHU_0801
A-amylase, glycoside hydrolase family 57 protein.
 
  
 0.720
CHU_0802
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein.
 
   0.687
glgB
Candidate glycogen branching enzyme, glycoside hydrolase family 13 protein.
  
  
 0.576
blgA
Broad-specificity cellobiase.
     
 0.502
yijE
Integral membrane protein.
 
     0.480
CHU_3812
Glycosyltransferase-distantly-related protein.
       0.437
CHU_3808
Conserved hypothetical protein.
       0.408
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.