STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gmet_1671Membrane transglycosylase and transpeptidase PBP1A. (660 aa)    
Predicted Functional Partners:
mrcA
Peptidoglycan transglycosylase and transpeptidase MrcA.
 
 
0.943
ftsI
Peptidoglycan transglycosylase and transpeptidase FtsI.
 
 
 
0.887
Gmet_2365
Peptidoglycan-binding lipoprotein, SPOR and NLPC_P60 domain-containing.
 
 
 
 0.857
Gmet_1165
Cell division protein DivIVA, putative.
   
 
 0.842
mrdA
Peptidoglycan transpeptidase.
 
 
 
 0.807
Gmet_2778
Transpeptidase.
 
 
 
 0.778
Gmet_1435
SPOR domain protein.
    
 
 0.765
ftsW
Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.
 
 
 
 0.740
ddl/ftsQ
D-alanine--D-alanine ligase, cell division protein FtsQ fusion; Cell wall formation; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
 
 
 0.704
yceG
Protein of unknown function YceG; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
 
   
 0.665
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.