STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bamEPolyferredoxin, putative benzoyl-CoA reductase electron transfer protein. (1014 aa)    
Predicted Functional Partners:
bamF
benzoyl-CoA reductase electron transfer protein, selenocysteine-containing, putative.
 0.999
hdrB
Heterodisulfide oxidoreductase, CCG domain pair-containing subunit B.
 
 0.997
hdrG
Heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit G.
 
 0.990
hdrC
Heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit C.
 
 0.988
mvhS
Methyl viologen-reducing hydrogenase, small subunit.
 
 0.985
sdhE
Succinate dehydrogenase/fumarate reductase, type E, CCG domain pair subunit.
 
 
 0.968
mvhL
Methyl viologen-reducing hydrogenase, large subunit.
 
 
 0.947
hdrA
Heterodisulfide oxidoreductase, FAD-binding and iron-sulfur cluster-binding subunit A.
  
  
 
0.918
bamC-1
Iron-sulfur cluster-binding oxidoreductase, putative benzoyl-CoA reductase electron transfer protein.
 
   
 0.863
pcmB
FAD-dependent oxidoreductase.
      0.845
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.