STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
bamDIron-sulfur cluster-binding oxidoreductase, CCG domain pair-containing, putative benzoyl-CoA reductase electron transfer protein. (387 aa)    
Predicted Functional Partners:
bamC-1
Iron-sulfur cluster-binding oxidoreductase, putative benzoyl-CoA reductase electron transfer protein.
 
  
 0.877
bamB-1
benzoyl-CoA reductase, putative.
 
 
   0.785
bamE
Polyferredoxin, putative benzoyl-CoA reductase electron transfer protein.
 
   
 0.779
bamF
benzoyl-CoA reductase electron transfer protein, selenocysteine-containing, putative.
 
   
 0.636
Gmet_3334
Protein of unknown function DUF162.
  
 
 0.590
hdrD
Heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit D.
  
 
 0.590
bamA
6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; Involved in the central benzoyl-CoA catabolism. Catalyzes the addition of one molecule of water to the double bond and the hydrolytic cleavage of C-C bond in the alicyclic ring, 6-oxocyclohex-1-ene-1- carbonyl-CoA (6-OCH-CoA) to yield 3-hydroxypimelyl-CoA. Belongs to the enoyl-CoA hydratase/isomerase family.
 
    0.531
por
Pyruvate:ferredoxin/flavodoxin oxidoreductase.
  
  
 0.526
bamC-2
Iron-sulfur cluster-binding oxidoreductase, putative benzoyl-CoA reductase electron transfer protein.
 
  
 0.522
bamB-2
benzoyl-CoA reductase, putative.
  
 
   0.477
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
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