STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gmet_2195enoyl-CoA hydratase/isomerase. (257 aa)    
Predicted Functional Partners:
Gmet_2197
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.883
Gmet_1707
Sensor histidine kinase response regulator, PAS and PAS domain-containing; Domains: PAS, PAS, HisKA, HATPase_c, REC.
  
 
 0.796
Gmet_2213
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.794
Gmet_2642
Sensor histidine kinase response receiver, 4HB_MCP_1 and GAF domain-containing; Domains: 4HB_MCP_1, GAF, HisKA, HATPase_c, REC, REC, REC.
   
 
 0.790
Gmet_2998
Sensor histidine kinase response receiver; Domains: HisKA, HATPase_c, REC.
   
 
 0.789
Gmet_0077
Sensor histidine kinase response regulator, Cache_2 and HAMP domain-containing; Domains: Cache_2, HAMP, HisKA, HATPase_c, REC.
   
 
 0.781
Gmet_1243
Sensor histidine kinase response regulator, HAMP domain-containing; Domains: HAMP, HisKA, HATPase_c, REC.
   
 
 0.781
Gmet_2426
Sensor histidine kinase response regulator, HAMP domain-containing, putative heme-binding site; Domains: HAMP, HisKA, HATPase_c, REC.
   
 
 0.781
Gmet_0144
Thiolase, putative.
  
 0.772
bbsB
benzoylsuccinyl-CoA thiolase subunit; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.772
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.