Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gmet_1715 | Gmet_1717 | Gmet_1715 | Gmet_1717 | Short-chain acyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.876 |
Gmet_1715 | Gmet_2072 | Gmet_1715 | Gmet_2072 | Short-chain acyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.793 |
Gmet_1715 | Gmet_2196 | Gmet_1715 | Gmet_2196 | Short-chain acyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase. | 0.946 |
Gmet_1715 | Gmet_2203 | Gmet_1715 | Gmet_2203 | Short-chain acyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.799 |
Gmet_1715 | Gmet_2204 | Gmet_1715 | Gmet_2204 | Short-chain acyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase. | 0.946 |
Gmet_1715 | Gmet_2224 | Gmet_1715 | Gmet_2224 | Short-chain acyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.486 |
Gmet_1715 | Gmet_2269 | Gmet_1715 | Gmet_2269 | Short-chain acyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.813 |
Gmet_1715 | bamM | Gmet_1715 | Gmet_2075 | Short-chain acyl-CoA dehydrogenase. | glutaryl-CoA dehydrogenase. | 0.916 |
Gmet_1717 | Gmet_1715 | Gmet_1717 | Gmet_1715 | 3-hydroxyacyl-CoA dehydrogenase. | Short-chain acyl-CoA dehydrogenase. | 0.876 |
Gmet_1717 | Gmet_2196 | Gmet_1717 | Gmet_2196 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase. | 0.997 |
Gmet_1717 | Gmet_2204 | Gmet_1717 | Gmet_2204 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase. | 0.936 |
Gmet_1717 | Gmet_2224 | Gmet_1717 | Gmet_2224 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.646 |
Gmet_1717 | Gmet_3289 | Gmet_1717 | Gmet_3289 | 3-hydroxyacyl-CoA dehydrogenase. | isovaleryl-CoA dehydrogenase. | 0.552 |
Gmet_1717 | bamM | Gmet_1717 | Gmet_2075 | 3-hydroxyacyl-CoA dehydrogenase. | glutaryl-CoA dehydrogenase. | 0.698 |
Gmet_2072 | Gmet_1715 | Gmet_2072 | Gmet_1715 | 3-hydroxyacyl-CoA dehydrogenase. | Short-chain acyl-CoA dehydrogenase. | 0.793 |
Gmet_2072 | Gmet_2196 | Gmet_2072 | Gmet_2196 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase. | 0.996 |
Gmet_2072 | Gmet_2204 | Gmet_2072 | Gmet_2204 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase. | 0.936 |
Gmet_2072 | Gmet_2224 | Gmet_2072 | Gmet_2224 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.661 |
Gmet_2072 | Gmet_3289 | Gmet_2072 | Gmet_3289 | 3-hydroxyacyl-CoA dehydrogenase. | isovaleryl-CoA dehydrogenase. | 0.552 |
Gmet_2072 | bamM | Gmet_2072 | Gmet_2075 | 3-hydroxyacyl-CoA dehydrogenase. | glutaryl-CoA dehydrogenase. | 0.832 |
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