STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcp40H-13Methyl-accepting chemotaxis sensory transducer, class 40H. (550 aa)    
Predicted Functional Partners:
cheAY40H-2
Sensor histidine kinase CheA and response receiver CheY associated with MCPs of class 40H.
 
 0.989
cheV
Response receiver scaffold protein CheV; Domains: CheW, REC.
 
 0.968
cheA40H
Sensor histidine kinase CheA associated with MCPs of class 40H.
 
 0.966
cheA64H
Sensor histidine kinase CheA associated with MCPs of classes 40H and 40+24H.
 
 0.966
cheA36H
Sensor histidine kinase CheA associated with MCPs of class 36H.
 
 0.965
cheA34H
Sensor histidine kinase CheA associated with MCPs of class 34H.
 
 0.964
cheW64H
Scaffold protein CheW associated with MCPs of classes 40H and 40+24H.
 
 0.956
cheW40H-1
Scaffold protein CheW associated with MCPs of class 40H.
 
 0.953
cheW40H-2
Scaffold protein CheW associated with MCPs of class 40H.
 
 0.952
cheB64H-2
Protein glutamate methylesterase CheB associated with MCPs of classes 40H and 40+24H, response receiver domain-containing.
 
  0.945
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
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