STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_0601Serine/threonine protein kinase. (360 aa)    
Predicted Functional Partners:
Tfu_0599
Hypothetical protein.
 
    0.900
Tfu_0600
Hypothetical protein.
  
   0.858
Tfu_1041
Tyrosine protein kinase:Serine/threonine protein kinase:PASTA.
 
 
 0.795
Tfu_3066
Serine/threonine protein kinase.
 
 
 0.792
Tfu_1658
Tyrosine protein kinase:Serine/threonine protein kinase:Sel1-like repeat.
 
     0.772
Tfu_2361
Tyrosine protein kinase:Serine/threonine protein kinase.
  
     0.771
Tfu_3065
Tyrosine protein kinase:Serine/threonine protein kinase.
  
     0.770
Tfu_2375
Tyrosine protein kinase:Serine/threonine protein kinase.
  
     0.769
Tfu_0592
Tyrosine protein kinase:Serine/threonine protein kinase.
  
     0.768
Tfu_1141
Tyrosine protein kinase:Serine/threonine protein kinase.
  
     0.768
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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