node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tfu_0514 | Tfu_2183 | Tfu_0514 | Tfu_2183 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | Ribonuclease E and G. | 0.715 |
Tfu_0514 | fusA | Tfu_0514 | Tfu_2649 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.881 |
Tfu_0514 | pnp | Tfu_0514 | Tfu_0784 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.884 |
Tfu_0514 | rplC | Tfu_0514 | Tfu_2646 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.793 |
Tfu_0514 | rplD | Tfu_0514 | Tfu_2645 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.798 |
Tfu_0514 | rpoB | Tfu_0514 | Tfu_2654 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.614 |
Tfu_0514 | truB | Tfu_0514 | Tfu_0781 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.633 |
Tfu_1440 | Tfu_2183 | Tfu_1440 | Tfu_2183 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | Ribonuclease E and G. | 0.715 |
Tfu_1440 | fusA | Tfu_1440 | Tfu_2649 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.881 |
Tfu_1440 | pnp | Tfu_1440 | Tfu_0784 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.884 |
Tfu_1440 | rplC | Tfu_1440 | Tfu_2646 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.793 |
Tfu_1440 | rplD | Tfu_1440 | Tfu_2645 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.798 |
Tfu_1440 | rpoB | Tfu_1440 | Tfu_2654 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.614 |
Tfu_1440 | truB | Tfu_1440 | Tfu_0781 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.616 |
Tfu_2183 | Tfu_0514 | Tfu_2183 | Tfu_0514 | Ribonuclease E and G. | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | 0.715 |
Tfu_2183 | Tfu_1440 | Tfu_2183 | Tfu_1440 | Ribonuclease E and G. | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | 0.715 |
Tfu_2183 | infB | Tfu_2183 | Tfu_0778 | Ribonuclease E and G. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.451 |
Tfu_2183 | pnp | Tfu_2183 | Tfu_0784 | Ribonuclease E and G. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.958 |
Tfu_2183 | rho | Tfu_2183 | Tfu_2421 | Ribonuclease E and G. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.521 |
fusA | Tfu_0514 | Tfu_2649 | Tfu_0514 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; Belongs to the DEAD box helicase family. | 0.881 |