STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_0873Sulfate permease, SulP family. (597 aa)    
Predicted Functional Partners:
Tfu_0872
Transcriptional regulator, ArsR family.
   
 0.869
Tfu_1535
Ankyrin.
    
 
 0.807
Tfu_1019
Ubiquinol-cytochrome c reductase, cytochrome b subunit.
    
 
 0.789
Tfu_1451
Similar to Protein tyrosine/serine phosphatase.
  
   0.747
Tfu_1000
Probable phosphoesterase YhaO-putative DNA repair exonuclease.
  
   0.712
Tfu_2683
Proton-translocating NADH-quinone oxidoreductase, chain M.
  
 
 0.711
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
   
  
 0.623
Tfu_1220
Actinorhodin polyketide synthase acyl carrier protein / 3-oxoacyl-ACP synthase acyl carrier protein.
    
   0.601
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.601
Tfu_0350
NADH dehydrogenase (quinone).
  
  
 0.543
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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