STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_1271PAS:Protein phosphatase 2C-like:GAF. (585 aa)    
Predicted Functional Partners:
Tfu_0286
GAF sensor hybrid histidine kinase.
  
 
 0.899
Tfu_0610
Diguanylate cyclase/phosphodiesterase.
  
 
 0.859
Tfu_0122
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.850
Tfu_3055
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.837
Tfu_1739
PAS/Protein phosphatase 2C-like.
 
 
0.784
Tfu_2343
Multi-sensor signal transduction histidine kinase.
 
  
 0.775
Tfu_2796
Protein phosphatase 2C-like.
  
     0.770
Tfu_2764
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.727
Tfu_2200
Protein phosphatase 2C-like.
  
     0.654
Tfu_0177
Hypothetical protein.
 
 
 0.640
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.