STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pamOPutative monooxygenase; Catalyzes a Baeyer-Villiger oxidation reaction, i.e. the insertion of an oxygen atom into a carbon-carbon bond adjacent to a carbonyl, which converts ketones to esters. Is most efficient with phenylacetone as substrate, leading to the formation of benzyl acetate. Can also oxidize other aromatic ketones (benzylacetone, alpha- methylphenylacetone and 4-hydroxyacetophenone), some aliphatic ketones (dodecan-2-one and bicyclohept-2-en-6-one) and sulfides (e.g. methyl 4- tolylsulfide). (542 aa)    
Predicted Functional Partners:
Tfu_1487
Putative lipase/esterase.
  
 0.939
Tfu_0155
Esterase / lipase.
  
 0.936
Tfu_1239
Putative hydrolase.
  
 
 0.642
Tfu_1284
Putative acyl-CoA dehydrogenase.
  
   0.602
Tfu_1274
Conserved hypothetical protein; Belongs to the cytochrome P450 family.
 
 
 0.601
Tfu_2701
CcsB.
      
 0.582
Tfu_1792
Calcium-binding EF-hand.
    
 
 0.577
Tfu_1225
Putative cytochrome P450.
 
 
 0.556
Tfu_3108
Thioredoxin reductase.
     
 0.531
Tfu_1478
Conserved hypothetical protein; Belongs to the cytochrome P450 family.
 
 
 0.511
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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