STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_1514Serine/threonine protein kinase. (505 aa)    
Predicted Functional Partners:
Tfu_3062
Protein phosphatase 2C-like.
 
 0.836
Tfu_0297
Protein phosphatase 2C-like.
 
 
 0.831
Tfu_1395
Forkhead-associated.
 
 
 
 0.710
Tfu_3060
FHA domain protein.
 
 
 
 0.623
Tfu_3066
Serine/threonine protein kinase.
 
 
0.570
Tfu_1041
Tyrosine protein kinase:Serine/threonine protein kinase:PASTA.
 
 
0.568
Tfu_1084
Serine/threonine protein kinase.
  
     0.547
Tfu_1513
Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
       0.539
Tfu_3061
FHA domain protein.
 
 
 
 0.464
Tfu_1195
Putative regulator.
 
      0.426
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.