STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_1665Cellulose-binding, family II, bacterial type:Fibronectin, type III. (438 aa)    
Predicted Functional Partners:
Tfu_2712
Cellulase. Glycosyl Hydrolase family 5.
  
 0.937
Tfu_1959
Cellulose 1,4-beta-cellobiosidase.
 
   
0.741
Tfu_1213
Xylanase. Glycosyl Hydrolase family 11; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
   
 0.706
Tfu_1643
Ricin B lectin:Parallel beta-helix repeat.
  
     0.701
Tfu_0580
Chitinase. Glycosyl Hydrolase family 18.
   
 0.674
Tfu_0868
Chitinase. Glycosyl Hydrolase family 18; Belongs to the glycosyl hydrolase 18 family.
   
 0.669
Tfu_0900
Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5.
  
0.586
Tfu_2470
Fibronectin, type III.
 
   0.584
Tfu_0153
Pectate lyase/Amb allergen.
  
   
 0.579
Tfu_2791
Xylanase. Glycosyl Hydrolase family 10.
   
 0.499
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
Server load: low (24%) [HD]