STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_1878Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (275 aa)    
Predicted Functional Partners:
Tfu_2399
3-hydroxyacyl-CoA dehydrogenase.
 
 0.976
Tfu_0286
GAF sensor hybrid histidine kinase.
  
 
 0.889
Tfu_0253
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.634
Tfu_0436
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.634
Tfu_0875
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.634
Tfu_1278
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.634
Tfu_1484
Putative exported protein.
  
 0.634
Tfu_1520
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.634
Tfu_1903
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.634
Tfu_2394
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.634
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.