STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_2201Conserved hypothetical protein. (421 aa)    
Predicted Functional Partners:
Tfu_2034
Hemolysin A.
      
 0.650
whiB-3
Putative DNA-binding protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
   
  
 0.644
Tfu_0826
Helix-hairpin-helix DNA-binding, class 1.
  
    0.632
Tfu_2374
Putative pyrazinamidase / nicotinamidase.
     
 0.575
Tfu_0242
Putative integral membrane efflux protein.
   
  
 0.569
Tfu_1861
Probable POT family transport protein.
   
  
 0.569
Tfu_2854
Hypothetical protein.
   
  
 0.569
Tfu_1842
Enoyl-[acyl-carrier-protein] reductase (NADH).
      
 0.524
Tfu_2200
Protein phosphatase 2C-like.
       0.506
Tfu_3101
Putative membrane protein.
   
    0.483
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.