STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_2486beta-N-acetylhexosaminidase. Glycosyl Hydrolase family 3. (552 aa)    
Predicted Functional Partners:
Tfu_0220
Putative secreted esterase.
  
 0.955
Tfu_0580
Chitinase. Glycosyl Hydrolase family 18.
   
 
 0.908
Tfu_0868
Chitinase. Glycosyl Hydrolase family 18; Belongs to the glycosyl hydrolase 18 family.
   
 
 0.908
murQ
Putative phophosugar-binding protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.749
Tfu_2473
N-acetylglucosamine 6-phosphate deacetylase.
 
  
 0.726
Tfu_2487
Phosphoryl transfer system, HPr.
     
 0.590
Tfu_2489
Putative phosphoenolpyruvate-dependent sugar phosphotransferase.
     
 0.579
Tfu_2488
HAD-superfamily hydrolase subfamily IA, variant 3.
       0.565
Tfu_2322
Similar to N-acetylglucosamine kinase.
 
    0.552
Tfu_0620
Cellobiohydrolase. Glycosyl Hydrolase family 6; Belongs to the glycosyl hydrolase family 6.
      
 0.528
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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