STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_2590Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. (525 aa)    
Predicted Functional Partners:
Tfu_2452
Succinate dehydrogenase subunit A.
  
 0.929
Tfu_0434
L-proline dehydrogenase.
 
 
 0.928
Tfu_0686
Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.925
Tfu_0690
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.925
Tfu_2949
Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.918
Tfu_2451
Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
 0.915
Tfu_2453
Succinate dehydrogenase subunit C.
   
 
  0.900
Tfu_0247
Citrate synthase; Belongs to the citrate synthase family.
  
 0.880
Tfu_0566
2-oxoglutarate dehydrogenase E1 component.
  
 0.868
Tfu_2674
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
   
 0.843
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
Server load: low (26%) [HD]