STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_2712Cellulase. Glycosyl Hydrolase family 5. (619 aa)    
Predicted Functional Partners:
Tfu_2176
Endoglucanase. Glycosyl Hydrolase family 9.
 
 0.996
Tfu_0620
Cellobiohydrolase. Glycosyl Hydrolase family 6; Belongs to the glycosyl hydrolase family 6.
 
 0.986
Tfu_1627
Cellulose 1,4-beta-cellobiosidase / endoglucanase. Glycosyl Hydrolase family 9.
 
 0.976
Tfu_0901
Cellulase. Glycosyl Hydrolase family 5.
 
 0.964
Tfu_1074
Endoglucanase. Glycosyl Hydrolase family 6; Belongs to the glycosyl hydrolase family 6.
 
 0.942
Tfu_1665
Cellulose-binding, family II, bacterial type:Fibronectin, type III.
  
 0.937
Tfu_1607
Exo-1,4-beta-glucosidase.
 
 
 0.930
Tfu_0937
Beta-glucosidase. Glycosyl Hydrolase family 1.
    
 0.915
Tfu_1629
Beta-glucosidase.
    
 0.915
Tfu_1959
Cellulose 1,4-beta-cellobiosidase.
  
 0.911
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.