STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_2779Conserved hypothetical protein. (507 aa)    
Predicted Functional Partners:
Tfu_1982
SUF system FeS assembly protein.
 
 
 0.925
Tfu_1984
Iron-regulated ABC transporter ATPase subunit SufC.
 
  
 0.848
Tfu_1987
Iron-regulated ABC transporter membrane component SufB.
 
 
 0.771
Tfu_1986
Iron-regulated ABC transporter permease protein SufD.
 
 
 0.761
Tfu_0147
Similar to Metal-dependent hydrolase.
    
   0.572
Tfu_1034
Conserved hypothetical protein.
    
   0.572
Tfu_2780
Tripeptidyl-peptidase B. Serine peptidase. MEROPS family S33.
       0.507
Tfu_2781
Similar to Uncharacterized protein of PSP1.
       0.507
Tfu_2782
DNA polymerase III delta prime subunit.
       0.429
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.