STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_0707Phage tail length tape-measure protein. (1019 aa)    
Predicted Functional Partners:
CHK_3141
Hypothetical protein.
 
 
   0.815
CHK_0695
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
   
 0.800
CHK_0703
Phage major tail protein phi13.
 
     0.783
CHK_0021
Putative internalin.
  
     0.763
CHK_0072
Putative calcium binding hemolysin protein.
  
     0.750
CHK_0487
Putative surface protein, responsible for cell interaction; Contains cell adhesion domain and ChW-repeats.
 
    0.746
CHK_0709
Hypothetical protein.
   
   0.744
CHK_1013
Cell surface protein.
 
     0.735
CHK_0176
Hypothetical protein.
  
     0.724
CHK_2193
Hypothetical protein.
  
     0.689
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.