STRINGSTRING
XP_006473053.1 protein (Citrus sinensis) - STRING interaction network
"XP_006473053.1" - Uncharacterized protein in Citrus sinensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_006473053.1Uncharacterized protein; Trihelix transcription factor GT-2-like (624 aa)    
Predicted Functional Partners:
XP_006479431.1
Uncharacterized protein; Subtilisin-like protease SDD1-like (784 aa)
           
  0.726
XP_006481015.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (378 aa)
       
 
  0.624
XP_006467832.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (370 aa)
       
 
  0.624
XP_006481917.1
Uncharacterized protein LOC102619123 isoform X1 (516 aa)
           
  0.593
XP_006483638.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 16 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (292 aa)
           
  0.581
XP_006472718.1
Uncharacterized protein; Histone-lysine N-methyltransferase ASHR1-like (481 aa)
           
  0.580
XP_006495058.1
Uncharacterized protein LOC102628040 (385 aa)
           
  0.532
XP_006473052.1
Uncharacterized protein LOC102612442 (447 aa)
           
  0.532
XP_006488206.1
Reticulon-like protein B21-like (606 aa)
           
  0.481
XP_006487149.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 38 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (484 aa)
           
  0.481
Your Current Organism:
Citrus sinensis
NCBI taxonomy Id: 2711
Other names: C. sinensis, Citrus sinensis, Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange
Server load: low (8%) [HD]