Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APE_1056.1 | APE_1771 | APE_1056.1 | APE_1771 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the MEMO1 family. | 0.990 |
APE_1056.1 | APE_1865.1 | APE_1056.1 | APE_1865.1 | Conserved hypothetical protein. | PflA homolog. | 0.969 |
APE_1056.1 | taw1 | APE_1056.1 | APE_1059 | Conserved hypothetical protein. | Conserved hypothetical protein; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe); Belongs to the TYW1 family. | 0.450 |
APE_1771 | APE_1056.1 | APE_1771 | APE_1056.1 | Conserved hypothetical protein; Belongs to the MEMO1 family. | Conserved hypothetical protein. | 0.990 |
APE_1771 | APE_1865.1 | APE_1771 | APE_1865.1 | Conserved hypothetical protein; Belongs to the MEMO1 family. | PflA homolog. | 0.967 |
APE_1865.1 | APE_1056.1 | APE_1865.1 | APE_1056.1 | PflA homolog. | Conserved hypothetical protein. | 0.969 |
APE_1865.1 | APE_1771 | APE_1865.1 | APE_1771 | PflA homolog. | Conserved hypothetical protein; Belongs to the MEMO1 family. | 0.967 |
taw1 | APE_1056.1 | APE_1059 | APE_1056.1 | Conserved hypothetical protein; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe); Belongs to the TYW1 family. | Conserved hypothetical protein. | 0.450 |