Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APE_1136.1 | asd | APE_1136.1 | APE_1143 | Putative protein kinase. | Aspartate-semialdehyde dehydrogenase; ASADH. | 0.628 |
APE_1136.1 | guaA | APE_1136.1 | APE_2452 | Putative protein kinase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.617 |
APE_1136.1 | kae1 | APE_1136.1 | APE_1135 | Putative protein kinase. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37; Belongs to the KAE1 / TsaD family. | 0.991 |
APE_1136.1 | leuS | APE_1136.1 | APE_1015 | Putative protein kinase. | leucyl-tRNA synthetase; LeuRS; leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.557 |
APE_1136.1 | metG | APE_1136.1 | APE_1129 | Putative protein kinase. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily. | 0.582 |
APE_1136.1 | ntpA | APE_1136.1 | APE_1138.1 | Putative protein kinase. | Nucleoside-triphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.840 |
APE_1136.1 | rpoD | APE_1136.1 | APE_1744.1 | Putative protein kinase. | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | 0.565 |
APE_1136.1 | rps15p | APE_1136.1 | APE_1139 | Putative protein kinase. | 30S ribosomal protein S15P/S13e. | 0.849 |
APE_1136.1 | rps24e | APE_1136.1 | APE_1132.1 | Putative protein kinase. | 30S ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.809 |
APE_1136.1 | rps27ae | APE_1136.1 | APE_1132a | Putative protein kinase. | 30S ribosomal protein S27Ae; Belongs to the eukaryotic ribosomal protein eS31 family. | 0.713 |
asd | APE_1136.1 | APE_1143 | APE_1136.1 | Aspartate-semialdehyde dehydrogenase; ASADH. | Putative protein kinase. | 0.628 |
asd | guaA | APE_1143 | APE_2452 | Aspartate-semialdehyde dehydrogenase; ASADH. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.633 |
asd | kae1 | APE_1143 | APE_1135 | Aspartate-semialdehyde dehydrogenase; ASADH. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37; Belongs to the KAE1 / TsaD family. | 0.628 |
asd | metG | APE_1143 | APE_1129 | Aspartate-semialdehyde dehydrogenase; ASADH. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily. | 0.578 |
asd | ntpA | APE_1143 | APE_1138.1 | Aspartate-semialdehyde dehydrogenase; ASADH. | Nucleoside-triphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.446 |
asd | rps15p | APE_1143 | APE_1139 | Aspartate-semialdehyde dehydrogenase; ASADH. | 30S ribosomal protein S15P/S13e. | 0.681 |
guaA | APE_1136.1 | APE_2452 | APE_1136.1 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Putative protein kinase. | 0.617 |
guaA | asd | APE_2452 | APE_1143 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Aspartate-semialdehyde dehydrogenase; ASADH. | 0.633 |
guaA | kae1 | APE_2452 | APE_1135 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37; Belongs to the KAE1 / TsaD family. | 0.565 |
guaA | leuS | APE_2452 | APE_1015 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | leucyl-tRNA synthetase; LeuRS; leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.783 |
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