STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE_1622.1Conserved hypothetical protein. (389 aa)    
Predicted Functional Partners:
citB
Aconitate hydratase; Aconitase.
     
 0.624
APE_2460.1
FixX protein.
  
 
 0.538
APE_0159
Probable (S)-2,3-Di-O-farnesylgeranylglyceryl synthase.
 
  
 0.537
etfB
Electron transfer flavoprotein beta-subunit.
  
 
 0.516
etfB-2
Electron transfer flavoprotein beta-subunit.
  
 
 0.516
fgs
Farnesylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.482
etfA
Electron transfer flavoprotein alpha-subunit.
  
 
 0.469
etfA-2
Electron transfer flavoprotein alpha-subunit.
  
 
 0.469
APE_0763.1
Hypothetical protein.
 
   
 0.453
APE_1623
Cytochrome c oxidase (ba3-type) subunit I; Belongs to the heme-copper respiratory oxidase family.
     
 0.444
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.