STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BH1992Spore germination protein. (382 aa)    
Predicted Functional Partners:
BH1991
Spore germination protein; BH1991; divided.
 
  
 0.954
BH1990
Spore germination protein; BH1990; divided.
 
  
 0.891
BH1989
Spore germination protein.
 
  
 0.840
BH2186
BH2186; unknown conserved protein.
 
  
 0.770
BH1359
BH1359; unknown conserved protein.
  
     0.642
gerKC
Spore germination protein KC; BH1935.
 
  
 0.640
spoIIIAE
Mutants block sporulation after engulfment; BH2793.
  
     0.638
gerKB
Spore germination protein KB; BH1936; germination response to the combination of glucose, fructose, L-asparagine.
  
    0.634
BH1993
BH1993; unknown.
       0.625
BH3142
BH3142; unknown conserved protein in B. subtilis.
  
    0.588
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.