STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoVFADipicolinate synthase subunit A; BH2403. (292 aa)    
Predicted Functional Partners:
spoVFB
Dipicolinate synthase subunit B; Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA).
 
  
 0.991
BH1265
BH1265; unknown.
  
     0.729
BH3151
BH3151 protein; Probably functions as a manganese efflux pump.
  
     0.691
BH1641
BH1641; unknown conserved protein in B. subtilis.
  
    0.641
BH2404
BH2404; unknown conserved protein.
 
     0.635
BH3770
Putative manganese efflux pump MntP; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
  
     0.627
BH1360
Stage IV sporulation protein.
  
     0.599
BH0075
BH0075; unknown conserved protein in bacilli.
  
     0.598
spoIIE
Stage II sporulation protein E; BH0078.
  
     0.597
spoIIP
Stage II sporulation protein P; BH1903; required for dissolution of the septal cell wall.
  
   
 0.591
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.