Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BH1240 | BH2708 | gene:10727134 | gene:10728606 | Single-strand DNA-specific exonuclease. | ABC transporter. | 0.477 |
BH1851 | BH2708 | gene:10727749 | gene:10728606 | BH1851; unknown conserved protein in others. | ABC transporter. | 0.438 |
BH2707 | BH2708 | gene:10728605 | gene:10728606 | BH2707; unknown. | ABC transporter. | 0.441 |
BH2707 | opuE | gene:10728605 | gene:10728604 | BH2707; unknown. | Proline transporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.791 |
BH2708 | BH1240 | gene:10728606 | gene:10727134 | ABC transporter. | Single-strand DNA-specific exonuclease. | 0.477 |
BH2708 | BH1851 | gene:10728606 | gene:10727749 | ABC transporter. | BH1851; unknown conserved protein in others. | 0.438 |
BH2708 | BH2707 | gene:10728606 | gene:10728605 | ABC transporter. | BH2707; unknown. | 0.441 |
BH2708 | BH2709 | gene:10728606 | gene:10728607 | ABC transporter. | BH2709; unknown. | 0.861 |
BH2708 | dfp | gene:10728606 | gene:10728408 | ABC transporter. | Flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.406 |
BH2708 | opuE | gene:10728606 | gene:10728604 | ABC transporter. | Proline transporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.484 |
BH2709 | BH2708 | gene:10728607 | gene:10728606 | BH2709; unknown. | ABC transporter. | 0.861 |
dfp | BH2708 | gene:10728408 | gene:10728606 | Flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | ABC transporter. | 0.406 |
opuE | BH2707 | gene:10728604 | gene:10728605 | Proline transporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | BH2707; unknown. | 0.791 |
opuE | BH2708 | gene:10728604 | gene:10728606 | Proline transporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | ABC transporter. | 0.484 |