STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase; BH2757; Belongs to the xylose isomerase family. (440 aa)    
Predicted Functional Partners:
xylB
Xylose kinase; BH2756.
 
 
 0.999
fruA
PTS system, fructose-specific enzyme II, BC component; BH0828.
   
 
 0.941
BH3843
Oxidoreductase.
 
 
 0.923
BH1857
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
    
 0.913
BH0189
Sorbitol dehydrogenase; Polyol dehydrogenase that catalyzes the NAD(+)-dependent oxidation of various sugar alcohols. Is active with D-sorbitol (D- glucitol), xylitol and L-iditol as substrates, leading to the C2- oxidized products D-fructose, D-xylulose and L-sorbose, respectively.
     
 0.911
gutB
Sorbitol dehydrogenase; BH0187.
     
 0.910
BH1951
BH1951; unknown conserved protein.
     
 0.910
xynB
Xylan beta-1,4-xylosidase; BH3683; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.856
BH2723
Beta-galactosidase.
    
 0.838
BH0797
Glucose kinase.
    
 0.832
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
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