STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tglTransglutaminase; Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links. Belongs to the bacillus TGase family. (284 aa)    
Predicted Functional Partners:
cotE
Outer spore coat protein; BH2370.
     
 0.761
cwlJ
Cell wall hydrolase (sporulation); Probable spore cortex-lytic enzyme involved in the depolymerization of cortex peptidoglycan during germination. Belongs to the CwlJ family.
  
   
 0.684
cotD
Inner spore coat protein D; BH1767.
      
 0.616
cotX
Spore coat protein X (insoluble fraction); BH2192.
   
  
 0.610
spoIVA
Stage IV sporulation protein A (spore cortex formation and coat assembly); ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
      
 0.590
bofA
Inhibitor of the pro-sigma K processing machinery; BH0038.
  
     0.581
cotN
Spore coat-associated protein; BH2129.
      
 0.561
BH3969
BH3969; unknown.
       0.548
pdhD
Pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase); BH2652.
      
 0.506
BH1454
Spore germination protein.
  
     0.499
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
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