STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BH1913BH1913; unknown conserved protein in bacilli. (551 aa)    
Predicted Functional Partners:
lplC
Transmembrane lipoprotein; BH1912.
 
 
 0.954
lplB
Transmembrane lipoprotein; BH1911.
 
  
 0.924
BH2113
ABC transporter (permease).
 
 
 0.862
BH1910
Two-component response regulator.
 
   
 0.861
BH1909
Two-component sensor histidine kinase.
 
     0.820
BH2112
Transmembrane lipoprotein.
 
  
 0.775
BH2109
BH2109; unknown conserved protein.
 
   
 0.722
BH2105
Xylanase Y; Hydrolyzes xylooligosaccharides with a degree of polymerization of greater than or equal to 3, releasing xylose from the reducing end. Only hydrolyzes the beta anomers of xylooligosaccharides, with inversion of anomeric configuration. Hydrolyzes the glucose and xylose-based trisaccharides where xylose is located at the -1 subsite, GXX, XXG and GXG. Does not hydrolyze xylan, chitosan, lichenan, curdlan or carboxymethylcellulose.
 
    0.711
BH1064
BH1064; unknown conserved protein.
  
     0.686
BH2110
Histidine kinase; BH2110; unknown conserved protein.
 
     0.678
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.