STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL0151N-terminus is similar to bacteriophage lambda tail fiber assembly protein Tfa SWALL:TFA_LAMBD (SWALL:P03740) (194 aa) fasta scores: E(): 0.011, 27.89% id in 190 aa, and to the N-terminal region of Ralstonia solanacearum putative tail fiber assembly-like protein rsc1920 or rs03489 SWALL:Q8XY43 (EMBL:AL646067) (250 aa) fasta scores: E(): 3.5e-09, 41.73% id in 115 aa. Similar to BPSS1083, 97.758% identity (97.758% ungapped) in 223 aa overlap. (223 aa)    
Predicted Functional Partners:
BPSL0153
Putative phage protein; Similar to bacteriophage phi CTX Orf19 protein SWALL:Q9ZXK7 (EMBL:AB008550) (178 aa) fasta scores: E(): 4.7e-15, 37.83% id in 148 aa, and to Xanthomonas axonopodis pv. citri str. 306 phage-related tail protein I SWALL:AAM37503 (EMBL:AE011905) (180 aa) fasta scores: E(): 3.5e-30, 50.29% id in 171 aa. Similar to BPSS1081, 99.457% identity (99.457% ungapped) in 184 aa overlap.
  
  
 0.887
BPSL0152
Phage-related tail fiber protein; No significant database matches to the full length CDS. N-terminal region is similar to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail fiber protein Orf8 SWALL:AAM42256 (EMBL:AE012412) (401 aa) fasta scores: E(): 9e-20, 31.07% id in 399 aa. C-terminus is similar to the C-terminal region of Escherichia coli side tail fiber protein homolog from lambdoid prophage RAC StfR SWALL:STFR_ECOLI (SWALL:P76072) (1120 aa) fasta scores: E(): 0.02, 25.6% id in 578 aa. Similar to BPSS1082, 98.348% identity (98.348% ungapped) in 787 aa overlap.
  
  
 0.883
BPSL0155
Similar to bacteriophage P2 baseplate assembly protein W SWALL:VPW_BPP2 (SWALL:P51768) (115 aa) fasta scores: E(): 9.9e-12, 36.28% id in 113 aa, and to bacteriophage phi CTX Orf17 protein SWALL:Q9ZXK9 (EMBL:AB008550) (114 aa) fasta scores: E(): 1.1e-15, 43.59% id in 117 aa. Similar to BPSS1079, 99.167% identity (99.167% ungapped) in 120 aa overlap.
  
    0.870
BPSL0154
Similar to bacteriophage P2 baseplate assembly protein J SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 2.4e-45, 45.6% id in 296 aa, and to Salmonella typhi phage baseplate assembly protein STY3689 SWALL:Q8Z344 (EMBL:AL627279) (302 aa) fasta scores: E(): 2.3e-48, 49.66% id in 296 aa. Similar to BPSS1080, 95.017% identity (95.017% ungapped) in 301 aa overlap.
  
  
 0.868
BPSL0156
Similar to bacteriophage P2 baseplate assembly protein V SWALL:VPV_BPP2 (SWALL:P31340) (211 aa) fasta scores: E(): 4.3e-14, 34.93% id in 229 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related baseplate protein V SWALL:AAM42258 (EMBL:AE012413) (187 aa) fasta scores: E(): 2.8e-16, 36.46% id in 181 aa. Similar to BPSS1078, 96.903% identity (96.903% ungapped) in 226 aa overlap.
  
  
 0.862
BPSL0150
Similar to bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 2.1e-90, 61.63% id in 391 aa, and to Ralstonia solanacearum probable phage-related protein rsc1918 or rs03487 SWALL:Q8XY45 (EMBL:AL646067) (391 aa) fasta scores: E(): 3.1e-100, 67.26% id in 388 aa. Identical to BPSS1084, 100.000% identity (100.000% ungapped) in 390 aa overlap.
  
  
 0.844
BPSL0149
Similar to bacteriophage P2 major tail tube protein FII SWALL:VPF2_BPP2 (SWALL:P22502) (171 aa) fasta scores: E(): 1.8e-26, 44.7% id in 170 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein FII SWALL:AAM42261 (EMBL:AE012413) (169 aa) fasta scores: E(): 8.2e-37, 54.16% id in 168 aa. Similar to BPSS1085, 99.408% identity (99.408% ungapped) in 169 aa overlap.
  
  
 0.808
BPSL0144
Putative phage protein; Similar to bacteriophage 186 late control gene D protein SWALL:VPD_BP186 (SWALL:P21679) (389 aa) fasta scores: E(): 4.9e-35, 41.59% id in 363 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein D SWALL:AAM42266 (EMBL:AE012413) (328 aa) fasta scores: E(): 8e-63, 49.69% id in 328 aa. Similar to BPSS1089, 97.253% identity (97.253% ungapped) in 364 aa overlap.
  
  
 0.622
BPSS1084
Similar to Bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 1.9e-90, 61.63% id in 391 aa, and to Ralstonia solanacearum probable phage-related protein rsc1918 or rs03487 SWALL:Q8XY45 (EMBL:AL646067) (391 aa) fasta scores: E(): 2.7e-100, 67.26% id in 388 aa, and to Salmonella typhimurium fels-2 prophage: similar to tail sheath proteins in phage p2 stm2701 SWALL:Q8ZMV0 (EMBL:AE008823) (390 aa) fasta scores: E(): 1e-97, 66.83% id in 389 aa.
  
  
 0.622
BPSL0145
Putative phage protein; Similar to bacteriophage phi CTX Orf26 protein SWALL:Q9ZXJ9 (EMBL:AB008550) (146 aa) fasta scores: E(): 2.6e-21, 51.2% id in 125 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein U SWALL:AAM42265 (EMBL:AE012413) (133 aa) fasta scores: E(): 3.7e-21, 53.6% id in 125 aa. Similar to BPSS1088, 98.582% identity (98.582% ungapped) in 141 aa overlap.
  
    0.613
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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