node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BPSL0118 | BPSL0750 | BPSL0118 | BPSL0750 | Similar to Escherichia coli DNA topoisomerase III TopB SWALL:TOP3_ECOLI (SWALL:P14294) (653 aa) fasta scores: E(): 2.1e-57, 33.71% id in 620 aa, and to Ralstonia solanacearum probable DNA topoisomerase III protein rsc0066 or rs02245 SWALL:Q8Y3B4 (EMBL:AL646057) (877 aa) fasta scores: E(): 0, 80.04% id in 872 aa. | Hypothetical protein; C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa. | 0.856 |
BPSL0118 | BPSL0763 | BPSL0118 | BPSL0763 | Similar to Escherichia coli DNA topoisomerase III TopB SWALL:TOP3_ECOLI (SWALL:P14294) (653 aa) fasta scores: E(): 2.1e-57, 33.71% id in 620 aa, and to Ralstonia solanacearum probable DNA topoisomerase III protein rsc0066 or rs02245 SWALL:Q8Y3B4 (EMBL:AL646057) (877 aa) fasta scores: E(): 0, 80.04% id in 872 aa. | Putative helicase SNF2 family protein; Similar to Bacteroides nodosus putative DEAH ATP-dependent helicase SWALL:O32494 (EMBL:U20246) (965 aa) fasta scores: E(): 2.4e-28, 28.84% id in 780 aa, and to Xanthomonas campestris helicase xcc0524 SWALL:AAM39840 (EMBL:AE012150) (967 aa) fasta scores: E(): 1.8e-11, 25.36% id in 962 aa, and to Halobacterium sp. similar to Escherichia coli vng5141g or vng6139G SWALL:O52003 (EMBL:AF016485) (979 aa) fasta scores: E(): 1.9e-10, 27.33% id in 995 aa. Possible alternative translational start site. | 0.858 |
BPSL0118 | BPSL1437 | BPSL0118 | BPSL1437 | Similar to Escherichia coli DNA topoisomerase III TopB SWALL:TOP3_ECOLI (SWALL:P14294) (653 aa) fasta scores: E(): 2.1e-57, 33.71% id in 620 aa, and to Ralstonia solanacearum probable DNA topoisomerase III protein rsc0066 or rs02245 SWALL:Q8Y3B4 (EMBL:AL646057) (877 aa) fasta scores: E(): 0, 80.04% id in 872 aa. | Similar to Escherichia coli DNA polymerase III, delta' subunit HolB or b1099 SWALL:HOLB_ECOLI (SWALL:P28631) (334 aa) fasta scores: E(): 4e-11, 34.82% id in 290 aa, and to Ralstonia solanacearum probable DNA polymerase III rsc1785 or rs04183 SWALL:Q8XYH3 (EMBL:AL646066) (336 aa) fasta scores: E(): 8.5e-47, 55.71% id in 341 aa. | 0.773 |
BPSL0118 | BPSL1970 | BPSL0118 | BPSL1970 | Similar to Escherichia coli DNA topoisomerase III TopB SWALL:TOP3_ECOLI (SWALL:P14294) (653 aa) fasta scores: E(): 2.1e-57, 33.71% id in 620 aa, and to Ralstonia solanacearum probable DNA topoisomerase III protein rsc0066 or rs02245 SWALL:Q8Y3B4 (EMBL:AL646057) (877 aa) fasta scores: E(): 0, 80.04% id in 872 aa. | Calcineurin-like phosphoesterase; Similar to Pseudomonas aeruginosa hypothetical protein pa0544 SWALL:Q9I5Z2 (EMBL:AE004490) (247 aa) fasta scores: E(): 1.9e-09, 36.27% id in 317 aa. Note: the central region of BPSL1970 does not present any similarities in the databases. | 0.792 |
BPSL0118 | BPSS2211 | BPSL0118 | BPSS2211 | Similar to Escherichia coli DNA topoisomerase III TopB SWALL:TOP3_ECOLI (SWALL:P14294) (653 aa) fasta scores: E(): 2.1e-57, 33.71% id in 620 aa, and to Ralstonia solanacearum probable DNA topoisomerase III protein rsc0066 or rs02245 SWALL:Q8Y3B4 (EMBL:AL646057) (877 aa) fasta scores: E(): 0, 80.04% id in 872 aa. | Similar to Pseudomonas aeruginosa probable ATP-dependent DNA ligase pa2138 SWALL:Q9I1X7 (EMBL:AE004641) (840 aa) fasta scores: E(): 3.9e-54, 42.03% id in 1123 aa, and to Xanthomonas campestris ATP-dependent DNA ligase xcc0105 SWALL:Q8PE76 (EMBL:AE012104) (1001 aa) fasta scores: E(): 4.3e-34, 35.13% id in 1147 aa. Note: There are some fragments in this CDS that present no similarities to any of the database matches. | 0.521 |
BPSL0118 | polA | BPSL0118 | BPSS1770 | Similar to Escherichia coli DNA topoisomerase III TopB SWALL:TOP3_ECOLI (SWALL:P14294) (653 aa) fasta scores: E(): 2.1e-57, 33.71% id in 620 aa, and to Ralstonia solanacearum probable DNA topoisomerase III protein rsc0066 or rs02245 SWALL:Q8Y3B4 (EMBL:AL646057) (877 aa) fasta scores: E(): 0, 80.04% id in 872 aa. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.848 |
BPSL0118 | recA | BPSL0118 | BPSL0776 | Similar to Escherichia coli DNA topoisomerase III TopB SWALL:TOP3_ECOLI (SWALL:P14294) (653 aa) fasta scores: E(): 2.1e-57, 33.71% id in 620 aa, and to Ralstonia solanacearum probable DNA topoisomerase III protein rsc0066 or rs02245 SWALL:Q8Y3B4 (EMBL:AL646057) (877 aa) fasta scores: E(): 0, 80.04% id in 872 aa. | Putative recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.891 |
BPSL0118 | recQ | BPSL0118 | BPSL3219 | Similar to Escherichia coli DNA topoisomerase III TopB SWALL:TOP3_ECOLI (SWALL:P14294) (653 aa) fasta scores: E(): 2.1e-57, 33.71% id in 620 aa, and to Ralstonia solanacearum probable DNA topoisomerase III protein rsc0066 or rs02245 SWALL:Q8Y3B4 (EMBL:AL646057) (877 aa) fasta scores: E(): 0, 80.04% id in 872 aa. | Similar to Escherichia coli ATP-dependent DNA helicase RecQ or b3822 SWALL:RECQ_ECOLI (SWALL:P15043) (607 aa) fasta scores: E(): 2.8e-77, 44.62% id in 614 aa, and to Ralstonia solanacearum probable ATP-dependent DNA helicase protein RecQ or Rsc3025 or Rs04732 SWALL:Q8XV07 (EMBL:AL646073) (637 aa) fasta scores: E(): 7.7e-178, 72.38% id in 630 aa. | 0.986 |
BPSL0748 | BPSL0749 | BPSL0748 | BPSL0749 | Hypothetical protein; No significant database matches to the full length CDS. N-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0325 or ecs0290 SWALL:Q8X7K6 (EMBL:AE005203) (138 aa) fasta scores: E(): 7.4e-11, 37.98% id in 129 aa, and the C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0326 or ecs0291 SWALL:Q8X7K5 (EMBL:AE005203) (205 aa) fasta scores: E(): 7e-12, 31.25% id in 192 aa. CDS is a possible fusion protein. | Hypothetical protein; Similar to Escherichia coli O157:H7 hypothetical protein z0327 or ecs0292 SWALL:Q8X7K4 (EMBL:AE005203) (152 aa) fasta scores: E(): 6.8e-05, 22.44% id in 147 aa. | 0.954 |
BPSL0748 | BPSL0750 | BPSL0748 | BPSL0750 | Hypothetical protein; No significant database matches to the full length CDS. N-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0325 or ecs0290 SWALL:Q8X7K6 (EMBL:AE005203) (138 aa) fasta scores: E(): 7.4e-11, 37.98% id in 129 aa, and the C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0326 or ecs0291 SWALL:Q8X7K5 (EMBL:AE005203) (205 aa) fasta scores: E(): 7e-12, 31.25% id in 192 aa. CDS is a possible fusion protein. | Hypothetical protein; C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa. | 0.954 |
BPSL0749 | BPSL0748 | BPSL0749 | BPSL0748 | Hypothetical protein; Similar to Escherichia coli O157:H7 hypothetical protein z0327 or ecs0292 SWALL:Q8X7K4 (EMBL:AE005203) (152 aa) fasta scores: E(): 6.8e-05, 22.44% id in 147 aa. | Hypothetical protein; No significant database matches to the full length CDS. N-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0325 or ecs0290 SWALL:Q8X7K6 (EMBL:AE005203) (138 aa) fasta scores: E(): 7.4e-11, 37.98% id in 129 aa, and the C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0326 or ecs0291 SWALL:Q8X7K5 (EMBL:AE005203) (205 aa) fasta scores: E(): 7e-12, 31.25% id in 192 aa. CDS is a possible fusion protein. | 0.954 |
BPSL0749 | BPSL0750 | BPSL0749 | BPSL0750 | Hypothetical protein; Similar to Escherichia coli O157:H7 hypothetical protein z0327 or ecs0292 SWALL:Q8X7K4 (EMBL:AE005203) (152 aa) fasta scores: E(): 6.8e-05, 22.44% id in 147 aa. | Hypothetical protein; C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa. | 0.954 |
BPSL0750 | BPSL0118 | BPSL0750 | BPSL0118 | Hypothetical protein; C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa. | Similar to Escherichia coli DNA topoisomerase III TopB SWALL:TOP3_ECOLI (SWALL:P14294) (653 aa) fasta scores: E(): 2.1e-57, 33.71% id in 620 aa, and to Ralstonia solanacearum probable DNA topoisomerase III protein rsc0066 or rs02245 SWALL:Q8Y3B4 (EMBL:AL646057) (877 aa) fasta scores: E(): 0, 80.04% id in 872 aa. | 0.856 |
BPSL0750 | BPSL0748 | BPSL0750 | BPSL0748 | Hypothetical protein; C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa. | Hypothetical protein; No significant database matches to the full length CDS. N-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0325 or ecs0290 SWALL:Q8X7K6 (EMBL:AE005203) (138 aa) fasta scores: E(): 7.4e-11, 37.98% id in 129 aa, and the C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0326 or ecs0291 SWALL:Q8X7K5 (EMBL:AE005203) (205 aa) fasta scores: E(): 7e-12, 31.25% id in 192 aa. CDS is a possible fusion protein. | 0.954 |
BPSL0750 | BPSL0749 | BPSL0750 | BPSL0749 | Hypothetical protein; C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa. | Hypothetical protein; Similar to Escherichia coli O157:H7 hypothetical protein z0327 or ecs0292 SWALL:Q8X7K4 (EMBL:AE005203) (152 aa) fasta scores: E(): 6.8e-05, 22.44% id in 147 aa. | 0.954 |
BPSL0750 | BPSL0763 | BPSL0750 | BPSL0763 | Hypothetical protein; C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa. | Putative helicase SNF2 family protein; Similar to Bacteroides nodosus putative DEAH ATP-dependent helicase SWALL:O32494 (EMBL:U20246) (965 aa) fasta scores: E(): 2.4e-28, 28.84% id in 780 aa, and to Xanthomonas campestris helicase xcc0524 SWALL:AAM39840 (EMBL:AE012150) (967 aa) fasta scores: E(): 1.8e-11, 25.36% id in 962 aa, and to Halobacterium sp. similar to Escherichia coli vng5141g or vng6139G SWALL:O52003 (EMBL:AF016485) (979 aa) fasta scores: E(): 1.9e-10, 27.33% id in 995 aa. Possible alternative translational start site. | 0.782 |
BPSL0750 | BPSL1437 | BPSL0750 | BPSL1437 | Hypothetical protein; C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa. | Similar to Escherichia coli DNA polymerase III, delta' subunit HolB or b1099 SWALL:HOLB_ECOLI (SWALL:P28631) (334 aa) fasta scores: E(): 4e-11, 34.82% id in 290 aa, and to Ralstonia solanacearum probable DNA polymerase III rsc1785 or rs04183 SWALL:Q8XYH3 (EMBL:AL646066) (336 aa) fasta scores: E(): 8.5e-47, 55.71% id in 341 aa. | 0.710 |
BPSL0750 | BPSL1970 | BPSL0750 | BPSL1970 | Hypothetical protein; C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa. | Calcineurin-like phosphoesterase; Similar to Pseudomonas aeruginosa hypothetical protein pa0544 SWALL:Q9I5Z2 (EMBL:AE004490) (247 aa) fasta scores: E(): 1.9e-09, 36.27% id in 317 aa. Note: the central region of BPSL1970 does not present any similarities in the databases. | 0.997 |
BPSL0750 | BPSS2211 | BPSL0750 | BPSS2211 | Hypothetical protein; C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa. | Similar to Pseudomonas aeruginosa probable ATP-dependent DNA ligase pa2138 SWALL:Q9I1X7 (EMBL:AE004641) (840 aa) fasta scores: E(): 3.9e-54, 42.03% id in 1123 aa, and to Xanthomonas campestris ATP-dependent DNA ligase xcc0105 SWALL:Q8PE76 (EMBL:AE012104) (1001 aa) fasta scores: E(): 4.3e-34, 35.13% id in 1147 aa. Note: There are some fragments in this CDS that present no similarities to any of the database matches. | 0.831 |
BPSL0750 | polA | BPSL0750 | BPSS1770 | Hypothetical protein; C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.950 |