STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL1801Similar to Escherichia coli type-1 fimbrial protein, A chain precursor FimA or PilA or b4314 SWALL:FM1A_ECOLI (SWALL:P04128) (182 aa) fasta scores: E(): 3.2e-17, 42.62% id in 183 aa, and to Klebsiella pneumoniae fimbrial subunit type 1 precursor SWALL:FM11_KLEPN (SWALL:P12266) (182 aa) fasta scores: E(): 3.2e-17, 42.62% id in 183 aa. (170 aa)    
Predicted Functional Partners:
BPSL1799
Similar to Escherichia coli O157:H7 putative fimbrial chaperone YfcS or z3599 or ecs3220 SWALL:Q8XCP6 (EMBL:AE005465) (252 aa) fasta scores: E(): 1.2e-32, 39.59% id in 245 aa, and to Proteus mirabilis chaperone protein PmfD precursor WALL:PMFD_PROMI (SWALL:P53520) (254 aa) fasta scores: E(): 4.4e-29, 36.63% id in 232 aa.
 
 
 0.965
BPSL1800
Similar to Escherichia coli outer membrane usher protein PapC precursor SWALL:PAPC_ECOLI (SWALL:P07110) (836 aa) fasta scores: E(): 1e-85, 38.1% id in 824 aa, and to Proteus mirabilis outer membrane usher protein PmfC precursor SWALL:PMFC_PROMI (SWALL:P53514) (828 aa) fasta scores: E(): 1.1e-66, 33.66% id in 799 aa.
 
 
 0.949
BPSS0092
Putative fimbria-related chaperone; Similar to Escherichia coli chaperone protein precursor EcpD or b0140 SWALL:ECPD_ECOLI (SWALL:P33128) (246 aa) fasta scores: E(): 3.4e-36, 45.04% id in 242 aa, and to Bordetella pertussis chaperone protein precursor FimB or FhaD SWALL:FIMB_BORPE (SWALL:P33409) (244 aa) fasta scores: E(): 4.8e-31, 44.08% id in 245 aa.
 
 
 0.873
BPSL1627
Putative fimbrial assembly chaperone precursor; Similar to Pseudomonas aeruginosa probable pili assembly chaperone pa0993 SWALL:Q9I4X6 (EMBL:AE004532) (237 aa) fasta scores: E(): 5.8e-28, 42.14% id in 242 aa, and to Escherichia coli chaperone protein precursor EcpD or b0140 SWALL:ECPD_ECOLI (SWALL:P33128) (246 aa) fasta scores: E(): 1.2e-21, 33.19% id in 232 aa.
 
 
 0.872
BPSS0093
Similar to Escherichia coli outer membrane usher protein precursor AfaC SWALL:AFAC_ECOLI (SWALL:P53517) (859 aa) fasta scores: E(): 8.4e-77, 33.4% id in 877 aa.
 
 
 0.842
BPSL1628
Similar to Salmonella typhimurium putative fimbrial usher StiC or stm0175 SWALL:Q8ZRR6 (EMBL:AE008702) (848 aa) fasta scores: E(): 1.6e-89, 34.28% id in 872 aa, and to Escherichia coli outer membrane usher protein AfaC precursor SWALL:AFAC_ECOLI (SWALL:P53517) (859 aa) fasta scores: E(): 9.4e-79, 32% id in 881 aa.
 
 
 0.815
BPSS0120
Similar to Yersinia pestis putative outer membrane fimbrial usher protein ypo0302 or y0562 SWALL:Q8ZJ27 (EMBL:AJ414142) (792 aa) fasta scores: E(): 1.4e-120, 42.67% id in 764 aa, and to Escherichia coli outer membrane usher protein precursor FanD SWALL:FAND_ECOLI (SWALL:P12050) (783 aa) fasta scores: E(): 5.4e-22, 22.91% id in 768 aa.
 
 
 0.780
BPSL2028
Similar to Yersinia pestis putative chaperone protein ypo1697 SWALL:Q8ZFK6 (EMBL:AJ414150) (250 aa) fasta scores: E(): 1.8e-33, 46.08% id in 230 aa, and to Xanthomonas campestris pili assembly chaperone EcpD or xcc1380 SWALL:AAM40678 (EMBL:AE012237) (251 aa) fasta scores: E(): 1.6e-11, 32.31% id in 263 aa.
 
 
 0.769
BPSS2053
Putative cell surface protein; Similar to Ralstonia solanacearum probable hemagglutinin-related protein Rsc1775 or Rs04371 SWALL:Q8XYI3 (EMBL:AL646066) (3165 aa) fasta scores: E(): 3.8e-164, 33.54% id in 3258 aa, and to Yersinia pestis putative adhesin Ypo0599 or y3579 SWALL:Q8ZIA8 (EMBL:AJ414143) (3295 aa) fasta scores: E(): 3.1e-62, 30.38% id in 3383 aa.
  
  
 0.764
BPSL2047
Conserved hypothetical protein; Similar to the N-terminal region of Ralstonia solanacearum hypothetical protein rsp0177 or rs04689 SWALL:Q8XTD6 (EMBL:AL646077) (740 aa) fasta scores: E(): 8.9e-16, 38.02% id in 760 aa.
  
     0.758
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.