STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plcNHypothetical protein (pseudogene); Hydrolyzes phosphatidylserine as well as phosphatidylcholine. (700 aa)    
Predicted Functional Partners:
clsA
Putative cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
     
 0.904
BPSS1883
Conserved hypothetical protein; Similar to Xanthomonas axonopodis cardiolipin synthase Cls or xac2871 SWALL:AAM37716 (EMBL:AE011929) (520 aa) fasta scores: E(): 1.5e-61, 41.13% id in 530 aa, and to Pseudomonas aeruginosa hypothetical protein pa5310 SWALL:Q9HTP4 (EMBL:AE004943) (529 aa) fasta scores: E(): 1.7e-61, 40.15% id in 528 aa.
     
 0.904
clsB
Putative phospholipase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
     
 0.903
BPSL1189
Putative kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
  0.900
psd
Putative decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
  0.900
suhB
Inositol-1-monophosphatase; Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 inositol-1-monophosphatase SuhB or SsyA SWALL:SUHB_ECOLI (SWALL:P22783) (267 aa) fasta scores: E(): 1.7e-47, 51.96% id in 254 aa, and to Ralstonia solanacearum probable inositol monophosphatase rsc1160 or rs04755 SWALL:Q8Y084 (EMBL:AL646063) (270 aa) fasta scores: E(): 2.7e-70, 68.16% id in 267 aa.
     
  0.900
BPSL2419
Similar to Escherichia coli, and Escherichia coli O157:H7 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA SWALL:PGSA_ECOLI (SWALL:P06978) (181 aa) fasta scores: E(): 7.9e-28, 48.38% id in 186 aa, and to Ralstonia solanacearum probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase transmembrane protein rsc1072 or rs04115 SWALL:Q8Y0H2 (EMBL:AL646062) (191 aa) fasta scores: E(): 1.7e-56, 73.05% id in 193 aa; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
BPSL2525
Conserved hypothetical protein; Similar to several including: Rhizobium loti hypothetical protein Mlr5374 SWALL:Q98BY6 (EMBL:AP003006) (199 aa) fasta scores: E(): 9.8e-26, 47.36% id in 190 aa and to Bradyrhizobium japonicum pPmtA protein pmtA SWALL:Q9LCT2 (EMBL:Y09633) (199 aa) fasta scores: E(): 9.8e-20, 42.28% id in 201 aa.
     
  0.900
BPSL2961
Putative phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
     
  0.900
BPSS2261
Putative phosphatidylserine decarboxylase; No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of Schizosaccharomyces pombe phosphatidylserine decarboxylase proenzyme 2 precursor SPAC31G5.15 SWALL:O14111 (EMBL:Z98979) (980 aa) fasta scores: E(): 4.9e-09, 33.33% id in 204 aa.
     
  0.900
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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