STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1649Putative sugar-binding protein; Similar over its C-terminal region to Dactylium dendroides galactose oxidase precursor GaoA SWALL:GAOA_DACDE (SWALL:Q01745) (680 aa) fasta scores: E(): 4.1e-70, 42.12% id in 489 aa, and partly to Polyangium cellulosum beta-mannanase SWALL:Q9ADL2 (EMBL:U24241) (502 aa) fasta scores: E(): 6.2e-10, 25.71% id in 350 aa. (806 aa)    
Predicted Functional Partners:
BPSS1650
Putative exported protein; No significant database matches.
       0.773
BPSS1651
Putative exported protein; Similar to Ralstonia solanacearum putative transmembrane protein rsc2292 or rs01263 SWALL:Q8XX26 (EMBL:AL646069) (207 aa) fasta scores: E(): 2e-09, 32.14% id in 168 aa.
       0.773
BPSS1774
Hypothetical protein; No significant database matches.
  
     0.499
BPSS1731
Putative pigment biosynthesis-related tyrosinase protein; Similar to Aspergillus oryzae tyrosinase MelO SWALL:TYRO_ASPOR (SWALL:Q00234) (539 aa) fasta scores: E(): 4.6e-35, 41.49% id in 535 aa, and to Agaricus bisporus tyrosinase Ppo2 SWALL:TYRO_AGABI (SWALL:O42713) (556 aa) fasta scores: E(): 2.1e-05, 28.1% id in 395 aa.
  
    0.497
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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