STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1832Phosphotyrosine phosphatase BceD; Similar to Escherichia coli, and Escherichia coli O157:H7 low molecular weight protein-tyrosine-phosphatase Wzb or b2061 or z3226 or ecs2866 SWALL:WZB_ECOLI (SWALL:P77153) (147 aa) fasta scores: E(): 5.1e-16, 40.27% id in 144 aa, and to Acinetobacter johnsonii low molecular weight protein-tyrosine-phosphatase Ptp SWALL:PTP_ACIJO (SWALL:O52787) (142 aa) fasta scores: E(): 1.7e-16, 39.86% id in 143 aa. Note: Also similar to BPSL2779 (145 aa) fasta scores: E(): 5.1e-15, 41.259% identity in 143 aa overlap. (144 aa)    
Predicted Functional Partners:
BPSL2291
Similar to Schizosaccharomyces pombe low molecular weight phosphotyrosine protein phosphatase STP1 or SPAC1071.12c or SPAC926.01c SWALL:PPAL_SCHPO (SWALL:P41893) (156 aa) fasta scores: E(): 3.1e-19, 44.85% id in 136 aa, and to Pseudomonas aeruginosa phosphotyrosine protein phosphatase pa2978 SWALL:Q9HZM6 (EMBL:AE004723) (154 aa) fasta scores: E(): 1.1e-26, 58.1% id in 148 aa.
  
  
 
0.926
BPSS1830
Putative exopolysaccharide biosynthesis related tyrosine-protein kinase; Similar to Acinetobacter johnsonii tyrosine-protein kinase Ptk SWALL:PTK_ACIJO (SWALL:O52788) (733 aa) fasta scores: E(): 9.7e-68, 33.1% id in 728 aa, and to Escherichia coli tyrosine-protein kinase Wzc or b2060 SWALL:WZC_ECOLI (SWALL:P76387) (720 aa) fasta scores: E(): 4e-63, 36.25% id in 742 aa.
 
 
 0.921
BPSL2779
Putative protein-tyrosine-phosphatase (low molecular weight); Similar to Acinetobacter johnsonii low molecular weight protein-tyrosine-phosphatase Ptp SWALL:PTP_ACIJO (SWALL:O52787) (142 aa) fasta scores: E(): 2.5e-16, 36.69% id in 139 aa, and to Ralstonia solanacearum probable low molecular weight protein-tyrosine-phosphatase EpsP or rsp1019 or rs02353 SWALL:EPP1_RALSO (SWALL:P58596) (145 aa) fasta scores: E(): 1.6e-25, 50.7% id in 142 aa, and to Ralstonia solanacearum probable low molecular weight protein-tyrosine-phosphatase EpsP SWALL:EPP2_RALSO (SWALL:Q45408) (145 aa) fasta scores [...]
  
  
 
0.912
BPSS1831
Putative exopolysaccharide (EPS) biosynthesis related polysaccharide lipoprotein; Similar to Erwinia amylovora amylovoran export outer membrane protein AmsH precursor SWALL:AMSH_ERWAM (SWALL:Q46629) (377 aa) fasta scores: E(): 1.3e-34, 38.36% id in 391 aa, and to Escherichia coli, and Escherichia coli O157:H7 putative polysaccharide export protein Wza precursor b2062 or z3227 or ecs2867 SWALL:WZA_ECOLI (SWALL:P76388) (379 aa) fasta scores: E(): 7.2e-34, 36.45% id in 395 aa, and to Vibrio vulnificus capsular polysaccharide transport protein Wza SWALL:Q938A5 (EMBL:AY055488) (378 aa) fast [...]
 
  
 0.905
BPSL2778
Putative tyrosine-protein kinase involved in EPS biosynthesis; Similar to Acinetobacter johnsonii tyrosine-protein kinase Ptk SWALL:PTK_ACIJO (SWALL:O52788) (733 aa) fasta scores: E(): 1.3e-70, 34.27% id in 741 aa, and to Ralstonia solanacearum putative tyrosine-protein kinase EpsB SWALL:EPB2_RALSO (SWALL:Q45409) (750 aa) fasta scores: E(): 1.4e-132, 53.65% id in 738 aa, and to Ralstonia solanacearum putative tyrosine-protein kinase EpsB or rsp1018 or rs02356 SWALL:EPB1_RALSO (SWALL:P58593) (751 aa) fasta scores: E(): 1.4e-132, 53.77% id in 742 aa.
 
 
 0.806
BPSS1978
Similar to Ralstonia solanacearum putative tyrosine-protein kinase EpsB SWALL:EPB2_RALSO (SWALL:Q45409) (750 aa) fasta scores: E(): 3.4e-36, 30.28% id in 733 aa, and to Escherichia coli O157:H7 tyrosine-protein kinase Etk or z1398 or ecs1137 SWALL:ETK_ECO57 (SWALL:Q8XC28) (726 aa) fasta scores: E(): 9.6e-36, 28.78% id in 747 aa.
 
 
 0.793
udg2
UDP-glucose 6-dehydrogenase 2; Similar to Pseudomonas aeruginosa UDP-glucose 6-dehydrogenase Udg or Ugd or pa2022 SWALL:UDG_PSEAE (SWALL:O86422) (453 aa) fasta scores: E(): 5.7e-83, 51.97% id in 456 aa, and to Rhizobium meliloti UDP-glucose 6-dehydrogenase RkpK or r01082 or smc02641 SWALL:UDG_RHIME (SWALL:O54068) (437 aa) fasta scores: E(): 2.8e-70, 49.66% id in 453 aa. Note: Also similar to BPSL2511 Udg (467 aa) fasta scores: E(): 1.5e-121, 76.304% identity in 460 aa overlap.
     
 0.755
BPSS1834
Putative lipopolysaccharide biosynthesis related protein; Similar to Escherichia coli putative colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ or b2047 SWALL:WCAJ_ECOLI (SWALL:P71241) (464 aa) fasta scores: E(): 2.5e-59, 39.65% id in 469 aa, and to Salmonella typhimurium putative undecaprenylphosphate glucosephosphotransferase WcaJ or stm2103 SWALL:Q9F799 (EMBL:AF285085) (464 aa) fasta scores: E(): 2.8e-58, 38.92% id in 465 aa. Note: Also similar to BPSL0618 (473 aa) fasta scores: E(): 3.5e-96, 50.433% identity in 462 aa overlap.
  
  
 0.723
BPSS1829
Similar to Anabaena sp. glycosyltransferase alr2840 SWALL:Q8YT86 (EMBL:AP003591) (315 aa) fasta scores: E(): 3.2e-53, 48.84% id in 303 aa, and to Archaeoglobus fulgidus succinoglycan biosynthesis protein af0620 SWALL:O29635 (EMBL:AE001062) (297 aa) fasta scores: E(): 1.9e-08, 30.73% id in 231 aa.
     
 0.567
BPSL0619
Similar to Vibrio vulnificus capsular polysaccharide transport protein Wza SWALL:Q938A5 (EMBL:AY055488) (378 aa) fasta scores: E(): 1.4e-22, 33.9% id in 407 aa, and to Ralstonia solanacearum EPSI polysaccharide export outer membrane protein EpsA SWALL:EPA1_RALSO (SWALL:P58597) (381 aa) fasta scores: E(): 1.3e-20, 34.65% id in 404 aa.
 
  
 0.563
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.