STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA_C0120Membrane-associated methyl-accepting chemotaxis protein with HAMP domain. (555 aa)    
Predicted Functional Partners:
cheW
Chemotaxis protein cheW.
 
  0.994
cheA
Chemotaxis protein cheA.
 
 0.990
cheR
Chemotaxis protein methyltransferase (cheR).
 
 0.986
chev
Chemotaxis protein CheV ortholog (CheW-like adaptor domain and CheY-like reciever domain).
 
 0.985
cheB
Chemotaxis protein CheB, (CheY-like receiver domain and methylesterase domain); Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.980
cheA-2
Chemotaxis histidine kinase, CheA (contains CheW-like adaptor domain).
 
 0.975
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  0.975
cheW-2
Chemotaxis signal transduction protein CheW.
 
  0.974
cheW-3
Chemotaxis protein CheW.
 
  0.974
cheR-2
Chemotaxis protein methyltransferase, cheR.
 
 0.911
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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