Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CA_C1070 | bacA | CA_C1070 | CA_C0501 | Transcriptional regulator, AcrR family. | Bacitracin resistance protein (bacA); Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.704 |
CA_C1432 | CA_C2395 | CA_C1432 | CA_C2395 | Undecaprenyl pyrophosphate synthase related enzyme. | Predicted phosphatase, YWOA B.subtilis ortholog. | 0.909 |
CA_C1432 | CA_C2438 | CA_C1432 | CA_C2438 | Undecaprenyl pyrophosphate synthase related enzyme. | Predicted phosphatase. | 0.909 |
CA_C1432 | CA_C2537 | CA_C1432 | CA_C2537 | Undecaprenyl pyrophosphate synthase related enzyme. | Predicted phosphatase. | 0.909 |
CA_C1432 | bacA | CA_C1432 | CA_C0501 | Undecaprenyl pyrophosphate synthase related enzyme. | Bacitracin resistance protein (bacA); Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.909 |
CA_C1432 | bacA-2 | CA_C1432 | CA_C0963 | Undecaprenyl pyrophosphate synthase related enzyme. | Bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.909 |
CA_C1432 | uppS | CA_C1432 | CA_C1791 | Undecaprenyl pyrophosphate synthase related enzyme. | Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.915 |
CA_C1495 | bacA | CA_C1495 | CA_C0501 | Enzyme of dihydrofolate reductase family, ortholog YWFD B.subtilis. | Bacitracin resistance protein (bacA); Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.753 |
CA_C1495 | bacA-2 | CA_C1495 | CA_C0963 | Enzyme of dihydrofolate reductase family, ortholog YWFD B.subtilis. | Bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.751 |
CA_C2395 | CA_C1432 | CA_C2395 | CA_C1432 | Predicted phosphatase, YWOA B.subtilis ortholog. | Undecaprenyl pyrophosphate synthase related enzyme. | 0.909 |
CA_C2395 | CA_C2438 | CA_C2395 | CA_C2438 | Predicted phosphatase, YWOA B.subtilis ortholog. | Predicted phosphatase. | 0.969 |
CA_C2395 | CA_C2537 | CA_C2395 | CA_C2537 | Predicted phosphatase, YWOA B.subtilis ortholog. | Predicted phosphatase. | 0.906 |
CA_C2395 | bacA | CA_C2395 | CA_C0501 | Predicted phosphatase, YWOA B.subtilis ortholog. | Bacitracin resistance protein (bacA); Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.912 |
CA_C2395 | bacA-2 | CA_C2395 | CA_C0963 | Predicted phosphatase, YWOA B.subtilis ortholog. | Bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.912 |
CA_C2395 | mraY | CA_C2395 | CA_C2127 | Predicted phosphatase, YWOA B.subtilis ortholog. | Phospho-N-acetylmuramoyl-pentapeptide transferase, MraY; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.904 |
CA_C2395 | uppS | CA_C2395 | CA_C1791 | Predicted phosphatase, YWOA B.subtilis ortholog. | Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.909 |
CA_C2438 | CA_C1432 | CA_C2438 | CA_C1432 | Predicted phosphatase. | Undecaprenyl pyrophosphate synthase related enzyme. | 0.909 |
CA_C2438 | CA_C2395 | CA_C2438 | CA_C2395 | Predicted phosphatase. | Predicted phosphatase, YWOA B.subtilis ortholog. | 0.969 |
CA_C2438 | CA_C2537 | CA_C2438 | CA_C2537 | Predicted phosphatase. | Predicted phosphatase. | 0.961 |
CA_C2438 | bacA | CA_C2438 | CA_C0501 | Predicted phosphatase. | Bacitracin resistance protein (bacA); Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.912 |
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