Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
argS | guaA | CA_C1041 | CA_C2700 | Arginyl-tRNA synthetase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.990 |
argS | leuS | CA_C1041 | CA_C0646 | Arginyl-tRNA synthetase. | Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.967 |
argS | metS | CA_C1041 | CA_C2991 | Arginyl-tRNA synthetase. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.954 |
argS | pheS | CA_C1041 | CA_C2357 | Arginyl-tRNA synthetase. | Phenylalanyl-tRNA synthetase (alpha subunit); Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.806 |
argS | pheT | CA_C1041 | CA_C2356 | Arginyl-tRNA synthetase. | Phenylalanyl-tRNA synthetase (beta subunit); Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.891 |
argS | serS | CA_C1041 | CA_C0017 | Arginyl-tRNA synthetase. | Seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.805 |
argS | serS-2 | CA_C1041 | CA_C0021 | Arginyl-tRNA synthetase. | Seryl-tRNA synthetase (serine-tRNA ligase); Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.855 |
argS | trpS | CA_C1041 | CA_C0626 | Arginyl-tRNA synthetase. | Tryptophan-tRNA synthetase, trpS; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.837 |
argS | vals | CA_C1041 | CA_C2399 | Arginyl-tRNA synthetase. | Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.949 |
argS | ychF | CA_C1041 | CA_C2134 | Arginyl-tRNA synthetase. | Predicted GTPase, YYAF B.subtilis ortholog; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.920 |
guaA | argS | CA_C2700 | CA_C1041 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Arginyl-tRNA synthetase. | 0.990 |
guaA | leuS | CA_C2700 | CA_C0646 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.669 |
guaA | metS | CA_C2700 | CA_C2991 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.903 |
guaA | pheS | CA_C2700 | CA_C2357 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Phenylalanyl-tRNA synthetase (alpha subunit); Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.669 |
guaA | pheT | CA_C2700 | CA_C2356 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Phenylalanyl-tRNA synthetase (beta subunit); Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.933 |
guaA | serS | CA_C2700 | CA_C0017 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.546 |
guaA | serS-2 | CA_C2700 | CA_C0021 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Seryl-tRNA synthetase (serine-tRNA ligase); Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.549 |
guaA | trpS | CA_C2700 | CA_C0626 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Tryptophan-tRNA synthetase, trpS; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.748 |
guaA | vals | CA_C2700 | CA_C2399 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.921 |
guaA | ychF | CA_C2700 | CA_C2134 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Predicted GTPase, YYAF B.subtilis ortholog; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.820 |
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