STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araEPossible sugar-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (469 aa)    
Predicted Functional Partners:
araR
Transcriptional regulator of the LacI family.
 
   
 0.878
galM
Aldose-1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 0.830
LacY
Sugar-proton symporter.
  
  
 0.803
CA_C3422
Sugar:proton symporter (possible xylulose).
  
  
 0.788
xylB-2
Xylulose kinase.
   
  
 0.779
CA_C3451
Sugar/Na+(H+) simporter.
  
  
 0.779
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
  
 0.774
xylB
Sugar kinase, possible xylulose kinase.
  
  
 0.746
tal
Transaldolase, TAL; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
   
  
 0.736
araD
Ribulose-5-phosphate 4-epimerase family protein.
  
  
 0.703
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.