STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA_C1626Glycerol dehydrogenase. (353 aa)    
Predicted Functional Partners:
CA_C1625
Phosphoserine phosphatase family protein.
 
    0.943
gpsA
Glycerol 3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.924
glpA
Glycerol-3-phosphate dehydrogenase, GLPA.
 
  
  0.912
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
   
  
 0.823
CA_C0688
1-acyl-sn-glycerol-3-phosphate acyltransferase.
     
 0.803
CA_C0965
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.803
dgkA/pgpB
Ciacylglycerol kinase/phosphatase B domain fusion protein.
     
  0.800
CA_C1624
Uncharacterized protein from DegV (B.subtilis) family; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
  
    0.738
alsR
Transcriptional regulators, LysR family; Belongs to the LysR transcriptional regulatory family.
   
  
 0.694
araD
Ribulose-5-phosphate 4-epimerase family protein.
  
  
 0.657
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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