STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA_C2400Serine/threonine kinase related protein, inactivated (HRDL motif absent) (fragment). (177 aa)    
Predicted Functional Partners:
htpG
Molecular chaperone, HSP90 family; Molecular chaperone. Has ATPase activity.
  
 
 0.963
CA_C0672
Fision threonyl-tRNA synthetase (N-terminal part) and uridine kinase.
   
 0.936
CA_C1065
Uncharacterized protein, related stage III sporulation protein AH of Bacillus sp.
   
 0.928
ppiB
Peptidyl-prolyl cis-transisomerase, cyclophilin family; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.830
CA_C1641
Ankyrin repeats containing protein.
   
 0.798
CA_C1645
Ankyrin repeats containing protein.
   
 0.798
CA_C2170
Predicted membrane protein.
  
 
 0.745
CA_C1298
Uncharacterized protein, related to B.subtilis spore coat protein COTS.
  
     0.727
CA_C3307
TPR-repeats containing protein.
  
 0.706
CA_C2910
Spore coat protein cotS related.
  
    0.703
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.