STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA_C2414Uncharacterized conserved protein, related to alpha-amylase/alpha-mannosidase; Belongs to the glycosyl hydrolase 57 family. (527 aa)    
Predicted Functional Partners:
CA_C1053
LPS glycosyltransferase.
  
 0.969
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.953
glgA
Glycogen synthase, glgA; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 
 0.953
CA_C0857
Glucan phosphorylase.
 
  
 0.928
CA_C2679
Pullulanase; Belongs to the glycosyl hydrolase 13 family.
     
 0.902
CA_C2415
Uncharacterized conserved protein.
 
     0.844
CA_C2354
Nifs family aminotransferase.
   
    0.730
CA_C0736
Possible glucanotransferase (putative endo alpha-1,4 polygalactosaminidase related protein).
      
 0.611
glgC
ADP-glucose pyrophosphorylase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
  
 0.593
spoIIID
Stage III sporulation protein D, SpoIIID.
   
    0.580
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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